Now showing items 1-20 of 1879

    • FU19 Nephrops Grounds 2025 UWTV Survey Report and catch scenarios for 2026

      Aristegui Ezquibela, Mikel; Doyle, Jennifer; Ryan, Gráinne; Rupnik, Aga; Fahy, James; Blaszkowski, Marcin; O’Connor, Sean; Linehan, Eva; Silvar, Paula; McCorriston, Peter; et al. (Marine Institute, 2025)
      This report provides the main results of the sixteenth underwater television survey of the various Nephrops patches in Functional Unit 19. The survey was multi-disciplinary in nature collecting UWTV and other ecosystem data. In 2025 a total of 42 UWTV stations were successfully completed. The mean density estimates varied considerably across the different patches. The 2025 raised abundance estimate showed an 11% decrease from the 2024 estimate and at 260 million burrows is below the MSY Btrigger reference point (430 million). Using the 2025 estimate of abundance and updated stock data implies catch in 2026 that correspond to the F ranges in the EU multi annual plan for Western Waters are between 317 and 357 tonnes (assuming that discard rates and fishery selection patterns do not change from the average of 2022–2024). Two species of sea pen were observed; Virgularia mirabilis and Pennatula phosphorea which have been observed on previous surveys of FU19. Trawl marks were observed at 7% of the stations surveyed.
    • Porcupine Bank Nephrops Grounds (FU16) 2025 UWTV Survey Report and catch scenarios for 2026

      Doyle, Jennifer (Marine Institute, 2025)
      This report provides the results of the fourteenth underwater television on the ‘Porcupine Bank Nephrops grounds’ ICES assessment area; Functional Unit 16. The survey was multidisciplinary in nature collecting UWTV and other ecosystem data. In total 69 UWTV stations were successfully completed (100% of the planned stations) in a randomised 6 nautical mile isometric grid covering the full spatial extent of the stock. The mean burrow density observed in 2025, adjusted for edge effect, was 0.17 burrows/m². The final kriged abundance estimate was 1220 million burrows with a CV of 3%. The 2025 abundance estimate was 27% lower than in 2024. Using the 2025 estimate of abundance and updated stock data imply that catches in 2026 should be between 1750 and 2169 tonnes, according to the EU MAP and ICES MSY approach (assuming that all catch is landed). Four species of sea-pen (Virgularia mirabilis, Funiculina quadrangularis, Pennatula phosphorea and the deepwater sea-pen Kophobelemnon stelliferum) were observed during the survey. Trawl marks were also observed on 65% of the stations surveyed.
    • Aran, Galway Bay and Slyne Head Nephrops Grounds (FU17) 2025 UWTV Survey Report and catch scenarios for 2026

      Doyle, Jennifer; Rapp, Tobias; Molloy, Ronan; Opanowski, Artur; Coupeau, Yann; Dower, Ciara; Dowdall, David; Joyce, Haleigh (Marine Institute, 2025)
      This report provides the main results and findings of the 23rd annual underwater television survey on the Aran, Galway Bay and Slyne Head Nephrops grounds, ICES assessment area; Functional Unit 17. The survey was multi-disciplinary in nature collecting UWTV, CTD and other ecosystem data. In 2025 a total of 43 UWTV stations were successfully completed, 33 on the Aran Grounds, 5 on Galway Bay and 5 on Slyne Head patches. The mean burrow density observed in 2025, adjusted for edge effect, was medium at 0.23 burrows/m². The final kriged burrow abundance estimate for the Aran Grounds was 278 million burrows with a CV (Coefficient of Variance; relative standard error) of 3%. The final abundance estimate for Galway Bay was 13 million and for Slyne Head was 8 million, with CVs of 2% and 3% respectively. The total abundance estimates have fluctuated considerably over the time series. The 2025 combined abundance estimate (299 million burrows) is 34% lower than in 2024, and it is below MSY Btrigger (540 million burrows). Using the 2025 estimate of abundance and updated stock data implies that catches in 2026 should be between 251 and 288 tonnes, according to the EU MAP and ICES MSY approach and assuming that discard rates and fishery selection patterns do not change from the average of 2022–2024. Virgularia mirabilis was the only sea-pen species observed on the UWTV footage. Trawl marks were not recorded at any of the Aran stations surveyed.
    • Transitioning Ireland’s maritime sector to carbon neutrality: Alternative fuels, infrastructure, and policy pathways

      Rigot-Müller, Patrick; Kovalenko, Alina; Sivappirakasam, Kamalakkannan; Coughlan, Joseph (Marine Institute, 2025)
      This report explores the transition of Ireland’s maritime industry towards carbon neutrality by 2050, focusing on alternative fuel adoption, socio-economic impacts, and implementation pathways. Conducted under the Marine Institute’s Research for Policy Awards, the study evaluates regulatory drivers such as the EU Green Deal, FuelEU Maritime, and IMO Net Zero Framework, alongside their implications for Irish ports and shipping companies. Using a core fleet analysis and stakeholder consultations, the research identifies high-priority corridors for Green Shipping Corridors (GSCs), assesses alternative fuels—including biofuels, methanol, ammonia, hydrogen, and electrofuels—and analyses port infrastructure requirements such as Onshore Power Supply (OPS). Findings highlight significant cost challenges under a business-as-usual scenario, with penalties projected to exceed €1.3 billion annually by 2050, underscoring the urgency of fuel transition strategies. The report proposes a phased roadmap: immediate OPS deployment by 2030, preparation for FuelEU revisions in 2027/28, and long-term GSC development on high-emission routes. Recommendations emphasise regulatory alignment, flexible fuel strategies, and collaborative task forces to mitigate risks and ensure Ireland’s maritime sector achieves net-zero emissions while maintaining competitiveness.
    • Characterisation of Coastal Reef Habitats: Scoping of Methods for Quantitative Monitoring Programmes

      Tully, Oliver; Scally, L.; O’Keefe, E.; Pfeiffer, N.; Dooley, Ger; Weir, Anthony; Myrens Hansen, Ingrid; Ferguson, Craig; Kandrot, Sarah (Marine Institute, 2025)
      This report looks at different ways to study and monitor coastal reef habitats, which are important for marine life and environmental health. It reviews tools and techniques—like underwater surveys, aerial photography, and satellite images—that can help scientists track changes in these habitats over time. The goal is to find reliable and practical methods that can be used regularly to understand how reef areas are changing, especially in protected zones. The report also suggests how these methods can be used in national monitoring programmes to support marine conservation and policy decisions.
    • Climate Action Roadmap 2025

      Marine Institute, / (Marine Institute, 2025)
      Is é an Plean 2025 (CAP25) an tríú nuashonrú bliantúil ar Phlean na hÉireann um Ghníomhú ar son na hAeráide. Leis an Sainordú gaolmhar um Ghníomhú ar son na hAeráide 2025 tugtar tacaíocht do chomhlachtaí san earnáil phoiblí, lena n-áirítear Foras na Mara, chun dea shampla a thabhairt maidir le gníomhú ar son na haeráide agus tá sé mar aidhm aige an gníomhú riachtanach ar son na haeráide a spreagadh sa tsochaí i gcoitinne chun astaíochtaí gás ceaptha teasa (GCT) na hÉireann a laghdú 51% agus éifeachtúlacht fuinnimh a laghdú 50% faoi 2030. The Climate Action Plan 2025 (CAP2) is the third annual update to Ireland’s Climate Action Plan. The associated Climate Action Mandate 2025 supports public sector bodies including the Marine Institute in leading by example on climate action and aims to inspire the necessary climate action in wider society to reduce Ireland’s greenhouse gas (GHG) emissions by 51% and energy efficiency by 50% by 2030. As set out in this Marine Institute Climate Action Roadmap 2025, the Marine Institute is committed to delivering the relevant outputs and activities outlined in CAP25 and the Climate Action Mandate 2025
    • Performance of eDNA Filtration Methods for Monitoring Fish Diversity in a Hyper‐Tidal Estuary

      Jackman, Jake M.; Sales, Naiara Guimarães; Benvenuto, Chiara; Drewitt, Andrea; Wolfenden, Andrew; Robins, Peter E.; Coscia, Ilaria; McDevitt, Allan D. (Wiley, 2025-10-07)
      Environmental DNA (eDNA)-based monitoring has become an established and efficient method for surveying biodiversity inaquatic systems. However, there is a need to compare and standardize sampling methods across different ecosystem types, par-ticularly complex ecosystems such as estuaries, where unique challenges exist for monitoring fish populations due to fluctuatingenvironmental factors. Here, we compare species richness obtained from eDNA metabarcoding data using four different eDNAfiltration methods: three manual filtration methods with different pore sizes (0.45, 1.2, and 5 μm) and a newly established pas-sive method, the metaprobe. The study was applied across a salinity gradient in a hyper-tidal estuarine ecosystem. Overall, 44fish species were detected across the four methods used. The 0.45 μm filter recovered the highest richness (39 species), then themetaprobe method (35), followed by the 1.2 μm (34) and 5 μm (33) filters. Filter performance between salinity gradients revealedthat the 0.45 μm and the 1.2 μm methods recovered the highest species richness across all sampled zones. The 0.45 μm also hadthe most consistent detection probabilities using representative species from each zone. While the 0.45 μm method appeared tobe the optimal method, each of the methods can be considered a viable and comparable option for biomonitoring in dynamicecosystems such as estuaries and rivers. In particular, the passive metaprobe (used in a freshwater system for the first time here)performed well in comparison to the manual filtering methods despite a short deployment time. This study provides criticalinsights for optimizing fish diversity assessments using eDNA metabarcoding in estuarine ecosystems, providing a valuableframework for future monitoring efforts in similar systems worldwide.
    • Population Genomics of the Blue Shark, Prionace glauca,Reveals Different Populations in the Mediterranean Sea and the Northeast Atlantic

      Leone, Agostino; Arnaud-Haond, Sophie; Babbucci, Massimiliano; Bargelloni, Luca; Coscia, Ilaria; Damalas, Dimitrios; Delord, Chrystelle; Franch, Rafaella; Garibaldi, Fulvio; Macias, David; et al. (Wiley, 2024-09)
      Populations of marine top predators have been sharply declining during the past decades, and one-third of chondrichthyans are currently threatened with extinction. Sustainable management measures and conservation plans of large pelagic sharks require knowledge on population genetic differentiation and demographic connectivity. Here, we present the case of the Mediterranean blue shark (Prionace glauca, L. 1758), commonly found as bycatch in longline fisheries and classified by the IUCN as critically endangered. The management of this species suffers from a scarcity of data about population structure and connectivity within the Mediterranean Sea and between this basin and the adjacent Northeast Atlantic. Here, we assessed the genetic diversity and spatial structure of blue shark from different areas of the Mediterranean Sea and the Northeast Atlantic through genome scan analyses. Pairwise genetic differentiation estimates (FST) on 203 specimens genotyped at 14,713 ddRAD-derived SNPs revealed subtle, yet significant, genetic differences within the Mediterranean sampling locations, and between the Mediterranean Sea and the Northeast Atlantic Ocean. Genetic differentiation suggests some degree of demographic independence between the Western and Eastern Mediterranean blue shark populations. Furthermore, results show limited genetic connectivity between the Mediterranean and the Atlantic basins, supporting the hypothesis of two distinct populations of blue shark separated by the Strait of Gibraltar. Although reproductive interactions may be limited, the faint genetic signal of differentiation suggests a recent common history between these units. Therefore, Mediterranean blue sharks may function akin to a metapopulation relying upon local demographic processes and connectivity dynamics, whereby the limited contemporary gene flow replenishment from the Atlantic may interplay with currently poorly regulated commercial catches and large-scale ecosystem changes. Altogether, these results emphasise the need for revising management delineations applied to these critically endangered sharks.
    • Using Environmental DNA to Characterize Amphibian Communities at Sites Infected with Batrachochytrium salamandrivorans in the Netherlands

      Davison, Anna M.; der Sluijs, Annemarieke Spitzen-van; O'Donnell, Matthew J.; Prasetyo, Andhika P.; Broadhurst, Holly A.; Sales, Naiara G.; Valentini, Alice; Herder, Jelger E.; Coscia, Ilaria; McDevitt, Allan D. (Society for the Study of Amphibians and Reptiles, 2025-06-23)
      Batrachochytrium salamandrivorans (Bsal) fungus has the potential to cause high mortality rates in some European salamanders and newts (urodelans) and is in the process of expanding its invasive range in Europe. Therefore, monitoring its distribution and better understanding both the species threatened and the mechanics of infection are essential in mitigating damage Bsal may cause. Environmental DNA has emerged as a promising noninvasive method for detecting both this fungal pathogen and amphibian communities in infected areas. We applied these methods in the province of Gelderland, Netherlands, where the pathogen has previously been detected and is expanding its range, with the goal of characterizing the natural amphibian community present. We sampled 27 bodies of water in the region surrounding the known outbreak sites, determined the presence or absence of Bsal using a targeted quantitative polymerase chain reaction assay, and applied an environmental DNA metabarcoding approach to characterize the amphibian communities using two different primer sets. The 12S vertebrate primer set outperformed the 16S amphibian primer set and detected all expected amphibians in the study area: Bufo bufo, Lissotriton vulgaris, Pelobates fuscus, Pelophylax spp., Rana temporaria and Triturus cristatus. Bsal was detected at 8 of 27 ponds. A distance-based redundancy analysis found a weak but significant relationship between Bsal presence and composition of amphibian communities. This study may provide a basis for future studies on Bsal and its relationship with amphibian communities in Europe, highlighting the need for further research into mechanisms of persistence and transmission between bodies of water.
    • Using Environmental DNA to Characterize Amphibian Communities at Sites Infected with Batrachochytrium salamandrivorans in the Netherlands

      Davison, Anna M.; der Sluijs, Annemarieke Spitzen-van; O'Donnell, Matthew J.; Prasetyo, Andhika P.; Broadhurst, Holly A.; Sales, Naiara G.; Valentini, Alice; Herder, Jelger E.; Coscia, Ilaria; McDevitt, Allan D. (Society for the Study of Amphibians and Reptiles, 2025-06-23)
      Batrachochytrium salamandrivorans (Bsal) fungus has the potential to cause high mortality rates in some European salamanders and newts (urodelans) and is in the process of expanding its invasive range in Europe. Therefore, monitoring its distribution and better understanding both the species threatened and the mechanics of infection are essential in mitigating damage Bsal may cause. Environmental DNA has emerged as a promising noninvasive method for detecting both this fungal pathogen and amphibian communities in infected areas. We applied these methods in the province of Gelderland, Netherlands, where the pathogen has previously been detected and is expanding its range, with the goal of characterizing the natural amphibian community present. We sampled 27 bodies of water in the region surrounding the known outbreak sites, determined the presence or absence of Bsal using a targeted quantitative polymerase chain reaction assay, and applied an environmental DNA metabarcoding approach to characterize the amphibian communities using two different primer sets. The 12S vertebrate primer set outperformed the 16S amphibian primer set and detected all expected amphibians in the study area: Bufo bufo, Lissotriton vulgaris, Pelobates fuscus, Pelophylax spp., Rana temporaria and Triturus cristatus. Bsal was detected at 8 of 27 ponds. A distance-based redundancy analysis found a weak but significant relationship between Bsal presence and composition of amphibian communities. This study may provide a basis for future studies on Bsal and its relationship with amphibian communities in Europe, highlighting the need for further research into mechanisms of persistence and transmission between bodies of water.
    • TC24_04 INFOMAR Survey Report

      Sheehan, Kevin; INFOMAR Survey Team (Marine Institute, 2025-09)
      Geological Survey Ireland (GSI) and Marine Institute (MI) conducted seabed mapping between 2003 and 2005 under the auspices of the Irish National Seabed Survey (INSS) and mapping continued from 2006 to present day under the INtegrated mapping FOr the sustainable development of Irelands MArine Resource (INFOMAR) programme. INSS, which commenced in 1999 under the GSI was one of the largest marine mapping programmes ever undertaken globally, with a focus on deep water mapping. INFOMAR is a joint venture between the GSI and the MI and is funded by the Irish Government through the Department of the Environment, Climate and Communications (DECC). INFOMAR Phase 1, 2006 to 2015 focused on mapping 26 priority bays and 3 priority areas around Ireland and creating a range of integrated mapping products of the physical and biological features of the seabed in those areas. INFOMAR Phase 2, 2016 to 2026 intends to map the remainder of Ireland’s entire seabed.
    • TC24_03 INFOMAR Survey Report

      Sheehan, Kevin; INFOMAR Survey Team (Marine Institute, 2025-04)
      Geological Survey Ireland (GSI) and Marine Institute (MI) conducted seabed mapping between 2003 and 2005 under the auspices of the Irish National Seabed Survey (INSS) and mapping continued from 2006 to present day under the INtegrated mapping FOr the sustainable development of Irelands MArine Resource (INFOMAR) programme. INSS, which commenced in 1999 under the GSI was one of the largest marine mapping programmes ever undertaken globally, with a focus on deep water mapping. INFOMAR is a joint venture between the GSI and the MI and is funded by the Irish Government through the Department of the Environment, Climate and Communications (DECC). INFOMAR Phase 1, 2006 to 2015 focused on mapping 26 priority bays and 3 priority areas around Ireland and creating a range of integrated mapping products of the physical and biological features of the seabed in those areas. INFOMAR Phase 2, 2016 to 2026 intends to map the remainder of Ireland’s entire seabed.
    • TC24_02 INFOMAR Survey Report

      Sheehan, Kevin; INFOMAR Survey Team (Marine Institute, 2025-04)
      Geological Survey Ireland (GSI) and Marine Institute (MI) conducted seabed mapping between 2003 and 2005 under the auspices of the Irish National Seabed Survey (INSS) and mapping continued from 2006 to present day under the INtegrated mapping FOr the sustainable development of Irelands MArine Resource (INFOMAR) programme. INSS, which commenced in 1999 under the GSI was one of the largest marine mapping programmes ever undertaken globally, with a focus on deep water mapping. INFOMAR is a joint venture between the GSI and the MI and is funded by the Irish Government through the Department of the Environment, Climate and Communications (DECC). INFOMAR Phase 1, 2006 to 2015 focused on mapping 26 priority bays and 3 priority areas around Ireland and creating a range of integrated mapping products of the physical and biological features of the seabed in those areas. INFOMAR Phase 2, 2016 to 2026 intends to map the remainder of Ireland’s entire seabed.
    • TC24_01 INFOMAR Survey Report

      Sheehan, Kevin; INFOMAR Survey Team (Marine Institute, 2025-05)
      Geological Survey Ireland (GSI) and Marine Institute (MI) conducted seabed mapping between 2003 and 2005 under the auspices of the Irish National Seabed Survey (INSS) and mapping continued from 2006 to present day under the INtegrated mapping FOr the sustainable development of Irelands MArine Resource (INFOMAR) programme. INSS, which commenced in 1999 under the GSI was one of the largest marine mapping programmes ever undertaken globally, with a focus on deep water mapping. INFOMAR is a joint venture between the GSI and the MI and is funded by the Irish Government through the Department of the Environment, Climate and Communications (DECC). INFOMAR Phase 1, 2006 to 2015 focused on mapping 26 priority bays and 3 priority areas around Ireland and creating a range of integrated mapping products of the physical and biological features of the seabed in those areas. INFOMAR Phase 2, 2016 to 2026 intends to map the remainder of Ireland’s entire seabed.
    • Summary Report on 2024 Residue Monitoring of Irish Farmed Finfish & Border Control Post Fishery Product Testing

      Glynn, Denise; McGovern, Evin; Reilly, Niamh; Kelly, Corinne; Moffat, R.; Kaur, Navdeep; Toomey, M.; Gordon, Emma (Marine Institute, 2025)
      On behalf of the Department of Agriculture, Food and Marine (DAFM), the Marine Institute carries out monitoring of chemical residues in finfish for aquaculture sector. This monitoring is set out in the annual National Residue Control Plan, which is approved by the European Commission, and is an important component of the DAFM food safety controls and is implemented under a service contract with the Food Safety Authority of Ireland. For the aquaculture sector, the Sea Fisheries Protection Authority (SFPA) with technical support from the MI is responsible for residue controls on farmed finfish. Since 1999, the Marine Institute has implemented the National Residues Monitoring Programme for aquaculture and in 2024, in excess of 1,982 tests and a total of 12,882 measurements were carried out on 92 samples of farmed finfish for a range of residues of pharmacologically active substances. Implementation of the Aquaculture 2024 risk-based control plan for production (Plan 1) involves taking samples at both farm and processing plant: 46 target samples taken at harvest: 36 farmed salmon and 10 freshwater trout. 46 target samples were taken at other stages of production: 36 salmon smolts and 10 freshwater trout. All 2024 samples were compliant. For target sampling of farmed fish, a summary table of the residue results from 2023 - 2024 is outlined in Table 1. Overall, the outcome for aquaculture remains one of consistently low occurrence of residues in farmed finfish, with no non-compliant target residues results for the period 2006-2014, 0.11% and 0.10% non-compliant target residues results in 2015 and 2016 respectively and no non-compliant target results for the period 2017 to 2024.
    • Cruise Report: Irish Anglerfish and Megrim Survey 2025

      Kelly, Eoghan; Stokes, David; Moore, Claire; Johnston, Graham; Aristegui Ezquibela, Mikel (Marine Institute, 2025)
      The 2025 Irish Anglerfish and Megrim Survey (IAMS) took place on-board the Research Vessel Celtic Explorer from 3rd to 27th February in ICES (International Council Exploration of the Sea) Divisions 7.b-c and 7.j-k, and 12th to 17th April in ICES Division 6.a. The main objective of the survey was to obtain biomass and abundance indices for anglerfish (Lophius piscatorius and Lophius budegassa) and megrim (Lepidorhombus whiffiagonis and Lepidorhombus boscii) in ICES Division 6.a (south of 58°N) and Subarea 7 (west of 8°W). Secondary objectives were to collect data on the distribution, relative abundance and biology of other commercially exploited species. For the seventh year, additional sampling took place in deep water (up to 1,500m) in order to monitor the recovery of exploited deep-water species following the decline of the deep-water fisheries in Irish waters since early 2000s (Kelly and Gerritsen, 2022). This work was funded under Marine Biodiversity Schemes of the European Maritime and Fisheries Fund (EMFF) from 2019 to 2021 and European Maritime, Fisheries and Aquaculture Fund (EMFAF) since 2022. IAMS is coordinated as part of ICES International Bottom Trawl Survey Working Group (IBTSWG) based on protocols developed by Marine Science Scotland (MSS) for the Scottish Anglerfish and Megrim Survey (SIAMISS).
    • Reportage of an Odyssey - Marine Climate Change & Our Coastal Communities

      Marine Institute (Marine Institute, 2025)
      Illustrated stories on the importance of the ocean to communities along the Irish Atlantic coastline. In 2020, artists worked with scientists and coastal communities along the Welsh coast and the Irish east and south coasts and the outputs were captured in the “Demystify” publication (2021). However, due to the Covid-19 pandemic it was not possible to complete this work with coastal communities on the west coast of Ireland and this part of the project had to be cancelled. In January 2023, the Marine Institute decided to finish this work and built a team to engage with coastal communities along the Irish Atlantic coast. The resultant artwork and commentary from these coastal communities are presented in this compendium “Reportage of an Odyssey”. “Reportage” is a type of visual art where the artist sketch on location to tell a specific story and it is the central pillar of this compendium. An odyssey can be defined as an eventful journey, usually involving a lot of different and exciting activities. Hence the name of this compendium.
    • EXPLORERS OUR OCEAN OUR FUTURE – MARINE SPATIAL PLANNING FOR KIDS POWERPOINT PRESENTATION

      Dromgool Regan, Cushla (Marine Institute, 2025)
      The Marine Spatial Planning for Kids Presentation provides an introduction to marine spatial planning for children, guiding their investigations into various topics, including planning, mapping, ports, fisheries, aquaculture, shipping, offshore wind energy, marine transport, recreation, and marine conservation. The presentation also guides key lessons and activities using the Explorers Marine Spatial Planning Digital Mapping tool.
    • Explorers Our Ocean Our Future - Marine Spatial Planning for Kids - Digital Maps, Handbook and Guide

      Dromgool-Regan, Cushla (Marine Institute, 2025)
      This handbook gives access to the Explorers Interactive Digital Maps of marine activities that take place within the National Marine Planning Fraework.
    • Explorers Marine Spatial Planning for Kids: Learning About Marine Spatial Planning Information Sheets for Children

      Dromgool-Regan, Cushla (Marine Institute, 2025)
      These information sheets will provide children with facts regarding Marine Spatial Planning